2023
[238]. Moon K, Cho J-C. 2023.
Freshwater viral metagenome analyses targeting dsDNA viruses.
In Pantaleo V. and Miozzi L. (eds) Viral Metagenomics: Methods and Protocols, 2nd ed. Springer.
(In Press)
[237]. Rajeev M, Jung I, Lim Y, Kim S, Kang I, Cho J-C. 2023.
Metagenome sequencing and recovery of 444 metagenome-assembled genomes from the biofloc aquaculture system.
[236]. Lim Y, Yang S-J, Kang I, Cho J-C. 2023.
Metagenomic data from surface seawater of the east coast of South Korea.
[235]. Shin D, Byun WS, Kang S, Kang I, Bae ES, An JS, Im JH, Park J, Kim E, Ko K, Hwang S, Lee H, Kwon Y, Ko Y-J, Hong S, Nam S-J, Kim SB, Fenical W, Yoon YJ, Cho J-C, Lee SK, Oh D-C. 2023.
Targeted and logical discovery of piperazic acid-bearing natural products based on genomic and spectroscopic signatures.
J. Am. Chem. Soc. 145(36):19676–19690
[234]. Lim Y, Seo J-H, Giovannoni SJ, Kang I, Cho J-C. 2023.
Cultivation of marine bacteria of the SAR202 clade.
[233]. Park MS, Kang I, Cho J-C. 2023.
Zwartia vadi sp. nov., a novel species of the GKS98 cluster isolated from a stream, and the reclassification of ‘Achromobacter panacis’ as Zwartia panacis comb. nov.
[232]. Rajeev M, Jung I, Song J, Kang I, Cho J-C. 2023.
Comparative microbiota characterization unveiled a contrasting pattern of floc-associated versus free-living bacterial communities in biofloc aquaculture.
[231]. Park MS, Sa H, Kang I, Cho J-C. 2023.
Proposal of Flavihumibacter fluvii sp. nov. as a replacement name for the effectively published but invalidated epithet Flavihumibacter fluminis Park et al. 2022.
[230]. Kim S, Lim Y, Kang I, Cho J-C. 2023.
Complete genome sequence of Amylibacter sp. IMCC11727 isolated from the East Sea, South Korea.
Kor. J. Microbiol. 59(2):145-147
[229]. Cho H, Lim Y, Kim S, Jo H, Kim M, Cho J-C. 2023.
A report of 20 unrecorded bacterial species isolated from the coastal area of Korean islands in 2022.
J. Species Res. 12(2):165-173.
[228]. Jo H, Park MS, Lim Y, Kang I, Cho J-C. 2023.
Ten novel species belonging to the genus Flavobacterium, isolated from freshwater environments: F. praedii sp. nov., F. marginilacus sp. nov., F. aestivum sp. nov., F. flavigenum sp. nov., F. luteolum sp. nov., F. gelatinilyticum sp. nov., F. aquiphilum sp. nov., F. limnophilum sp. nov., F. lacustre sp. nov., and F. eburneipallidum sp. nov.
[227]. Li S-H, Kang I, Cho J-C. 2023.
Metabolic versatility of the family Halieaceae revealed by the genomics of novel cultured isolates.
Microbiol. Spectr. 11(2):e03879-22.
[226]. Kim M, Park MS, Kang I, Cho J-C. 2023.
Thermomonas paludicola sp. nov., isolated from a lotus wetland.
Int. J. Syst. Evol. Microbiol. 73(2):005737.
[225]. Shin Y-H, Im JH, Kang I, Kim E, Jang SC, Cho E, Shin D, Hwang S, Du YE, Huynh T-H, Ko K, Ko Y-J, Nam S-J, Awakawa T, Lee J, Hong S, Abe I, Moore BS, Fenical W, Yoon YJ, Cho J-C, Lee SK, Oh K-B, Oh D-C. 2023. Genomic and spectroscopic signature-based discovery of natural macrolactams.
J. Am. Chem. Soc. 145(3):1886–1896.
2022
[224]. Kim S-K, Song J, Rajeev M, Kim SK, Kang I, Jang I-K, Cho J-C. 2022.
Exploring bacterioplankton communities and their temporal dynamics in the rearing water of a biofloc-based shrimp (Litopenaeus vannamei) aquaculture system.
[223]. Park MS, Sa H, Kang I, Cho J-C. 2022.
Flavihumibacter fluminis sp. nov. and Flavihumibacter rivuli sp. nov., isolated from a freshwater stream.
[222]. Kang S, Han J, Jang SC, An JS, Kang I, Kwon Y, Nam S-J, Shim SH, Cho J-C, Lee SK, Oh D-C. 2022. Epoxinnamide: An epoxy cinnamoyl-containing nonribosomal peptide from an intertidal mudflat-derived Streptomyces sp.
[221]. Cui J, Kim E, Moon DH, Kim TH, Kang I, Lim Y, Shin D, Hwang S, Du YE, Song MC, Bae M, Cho J-C, Jang J, Lee SK, Yoon YJ, Oh D-C. 2022.
Taeanamides A and B, nonribosomal lipo-decapeptides isolated from an intertidal-mudflat-derived Streptomyces sp.
2021
[220]. Kim S, Kang I*, Lee J-W, Jeon CO, Giovannoni SJ, Cho J-C*. 2021.
Heme auxotrophy in abundant aquatic microbial lineages.
Proc. Natl. Acad. Sci (USA). 118 (47): e2102750118.
[219]. Song J, Hwang J, Kang I, Cho J-C. 2021.
A sulfate-reducing bacterial genus, Desulfosediminicola gen. nov., comprising two novel species cultivated from tidal-flat sediments.
[218]. Kim M, Song J, Yu D, Kim Y, Bae SH, Park MS, Lim Y, Cho J-C. 2021.
A report of 28 unrecorded bacterial species in Korea, isolated from freshwater and sediment of the Han River watershed in 2020.
J. Species Res. 10(3): 227-236
[217]. Siddiqi MZ, Kim S-B, Cho J-C, Yoon J-H, Joh K, Seong CN, Bae J-W, Jahng KY, Jeon CO, Im W-T. 2021.
A report of 23 unrecorded bacterial species belonging to the class Alphaproteobacteria.
J. Species Res. 10(3): 191-200.
[216]. Song J, Kim M, Park MS, Joung Y, Kang I, Cho J-C. 2021.
Uliginosibacterium aquaticum sp. nov., isolated from a freshwater lake.
Curr. Microbiol. 78: 3381-3387.
[215]. Kim S, Islam MR, Kang I, Cho J-C. 2021.
Cultivation of dominant freshwater bacterioplankton lineages using a high-throughput dilution-to-extinction culturing approach over a one-year period.
[214]. Du YE, Bae ES, Lim Y, Cho J-C, Nam S-J, Shin J, Lee SK, Nam S-I, Oh D-C. 2021.
Svalbamides A and B, pyrrolidinone-bearing lipodipeptides from Arctic Paenibacillus sp.
[213]. Park MS, Song J, Chang J, Joung Y, Kang I, Cho J-C. 2021.
Permianibacter fluminis sp. nov., isolated from a freshwater stream.
Int. J. Syst. Evol. Microbiol. 71(4): 004771
[212]. Moon K, Cho J-C. 2021.
Metaviromics coupled with phage-host identification to open the viral ‘black box.’
[211]. Cho J-C. 2021.
Omics-based microbiome analysis in microbial ecology: from sequences to information.
2020
[210]. Song J, Joung Y, Li S-H, Hwang J, Cho J-C. 2020.
Sphingobacterium chungjuense sp. nov., isolated from a freshwater lake.
Int. J. Syst. Evol. Microbiol. 70(12):6126-6132.
[209]. Song J, Joung Y, Li S-H, Hwang J, Cho J-C. 2020.
Leeia aquatica sp. nov., isolated from freshwater.
Int. J. Syst. Evol. Microbiol. 70(11):5848-5853.
[208]. Kim S, Park MS, Song J, Kang I, Cho J-C. 2020.
High-throughput cultivation based on dilution-to-extinction with catalase supplementation and a case study of cultivating acI bacteria from Lake Soyang.
[207]. Moon K, Kim S, Kang I, Cho J-C. 2020.
Viral metagenomes of Lake Soyang, the largest freshwater lake in South Korea.
[206]. Hwang J, Song J, Lim Y, Joung Y, Cho J.-C. 2020.
Ferrimonas sediminicola sp. nov. and Ferrimonas aestuarii sp. nov., Fe(III)-reducing bacteria isolated from marine environments.
Int. J. Syst. Evol. Microbiol. 70(9):4927-4934.
[205]. Lim Y, Kang I, Cho J-C. 2020.
Genome characteristics of Kordia antarctica IMCC3317(T) and comparative genome analysis of the genus Kordia.
[204]. Moon K, Jeon JH, Kang I, Park KS, Lee K, Cha C-J, Lee SH, Cho J-C. 2020.
Freshwater viral metagenome reveals novel and functional phage-borne antibiotic resistance genes. Microbiome 8:75.
[203]. Li S-H, Song J, Kang, I, Hwang J, Cho J-C. 2020.
Aequoribacter fuscus gen. nov., sp. nov., a new member of the family Halieaceae, isolated from coastal seawater.
[202]. Park M, Jung I, Song J, Cho J-C. 2020.
Sphingorhabdus lacus sp. nov. and Sphingorhabdus profundilacus sp. nov., isolated from freshwater environments.
Int. J. Syst. Evol. Microbiol. 70(5):3202-3209.
[201]. Li S-H, Song J, Lim Y, Joung Y, Kang I, Cho J-C. 2020.
Halioglobus maricola sp. nov., isolated from coastal seawater.
Int. J. Syst. Evol. Microbiol. 70:1868-1875.
[200]. Noh H-J, Lee YM, Park CH, Lee HK, Cho J-C, Hong SG. 2020.
Microbiome in Cladonia squamosa is vertically stratified according to microclimatic conditions.
[199]. Han S, Kim S-H, Cho J-C, Song J, Bleckner G, Jung K-H. 2020.
Photochemical characterization of flavobacterial rhodopsin: The importance of the helix E region for heat stability.
[198] Kevbrin V*, Boltyanskaya Y, Grouzdev D, Koziaeva V, Park M-R, Cho J-C*. 2020.
Natronospirillum operosum gen. nov., sp. nov., a haloalkaliphilic satellite isolated from decaying biomass of a laboratory culture of cyanobacterium Geitlerinema sp. and proposal of Natronospirillaceae fam. nov., Saccharospirillaceae fam. nov. and Gynuellaceae fam. nov.
2019
[197] Lee M, Joo M, Sim M, Sim S-H, Kim H-L, Lee J, Ryu M, Yeom J-H, Hahn Y, Ha N-C*, Cho J-C*, Lee K-S*. 2019
The coordinated action of RNase III and RNase G controls enolase expression in response to oxygen availability in Escherichia coli.
[196] Song J, Lim Y, Jang H-J, Joung Y, Kang I, Hong S-J, Lee C-G, Cho J-C. 2019.
Isolation and genome analysis of Winogradskyella algicola sp. nov., the dominant bacterial species associated with the green alga Dunaliella tertiolecta.
J. Microbiol. 57(11): 982-990.
[195] Park M, Song J, Nam GG, Cho J-C. 2019.
Rhodoferax lacus sp. nov., isolated from a large freshwater lake.
Int. J. Syst. Evol. Microbiol. 69(10): 3135-3140.
[194] Jang H-J, Song J, Joung Y, Cho J-C. 2019.
Pelagibacterium sediminicola sp. nov., isolated from tidal flat sediment.
Int. J. Syst. Evol. Microbiol. 69(9): 2651-2657.
[193] Joung Y, Jang H-J, Kim MW, Hwang J, Song J, Cho J-C. 2019.
A report of 26 unrecorded bacterial species in Korea, isolated from urban streams of the Han River watershed in 2018.
J. Species Res. 8(3): 249-258.
[192] Kim S, Kang I, Seo J-H, Cho J-C. 2019.
Culturing the ubiquitous freshwater actinobacterial acI lineage by supplying a biochemical ‘helper’ catalase.
[191] Lee J, Kwon KK, Lim S-I, Song J, Choi AR, Yang S-H, Jung K-H, Lee J-H, Kang SG, Oh H-M, Cho J-C. 2019.
Isolation, cultivation, and genome analysis of proteorhodopsin-containing SAR116-clade strain Candidatus Puniceispirillum marinum IMCC1322.
[190] Song J, Jang H-J, Joung Y, Kang I, Cho J-C. 2019.
Sulfitobacter profundi sp. nov., isolated from deep seawater.
[189] Kim J-G, Kim S-J, Cvirkaite-Krupovic V, Yu W-J, Gwak J-H, López-Pérez M, Rodriguez-Valera F., Krupovic M, Cho J-C, Rhee S-K. 2019.
Spindle-shaped viruses infect marine ammonia-oxidizing thaumarchaea.
Proc. Natl. Acad. Sci (USA). 116(31): 15645-15650.
[188] Song J, Kang I, Joung Y, Yoshizawa S, Kaneko R, Oshima K, Hattori M, Hamasaki K, Kogure K, Kim S, Lee K, Cho J-C. 2019.
Genome analysis of Rubritalea profundi SAORIC-165T, the first deep-sea verrucomicrobial isolate, from the northwestern Pacific Ocean.
[187] Joung Y, Jang H-J, Song J, Cho J-C. 2019.
Flavobacterium aquariorum sp. nov., isolated from freshwater of the North Han River.
[186]Bae M, An JS, Bae ES, Oh J, Park SH, Lim Y, Ban YH, Kwon Y, Cho J-C, Yoon YJ, Lee SK, Shin J, Oh D-C. 2019.
Donghaesulfins A and B, Dimeric Benz[a]anthracene Thioethers from Volcanic Island Derived Streptomyces sp.
[185] Kim M-S, Jeong S-H, Kang J-W, Kim S-B, Cho J-C, Cha C-J, Im W-T, Bae J-W, Lee SD, Kim W-Y, Kim M-K, Seong C-N. 2019.
Unrecorded prokaryotic species belonging to the class Actinobacteria in Korea.
J. Species Res. 8 (1): 97-108.
[184] Joung Y, Jang H-J, Song J, Cho J-C. 2018.
Flavobacterium hydrophilum sp. nov. and Flavobacterium cheongpyeongense sp. nov., isolated from freshwater.
Int. J. Syst. Evol. Microbiol. 69(3): 602-609.
[183] Kim S-J, Kim J-G, Lee S-H, Park S-J, Gwak J-H, Jung M-Y, Chung W-H, Yang E-J, Park J, J Jung J, Hahn Y, Cho J-C, Madsen EL, Rodriguez-Valera F, Hyun J-H, Rhee, S-K. 2019.
Genomic and metatranscriptomic analyses of carbon remineralization in an Antarctic polynya.
[182] Baek K, Song J, Cho J-C, Chung EJ, Choi A. 2019.
Nibricoccus aquaticus gen. nov., sp. nov., a new genus of the family Opitutaceae isolated from hyporheic freshwater.
2018
[181] Baek K, Choi A, Lee YM, Lee HK, Cho J-C. 2018.
Leucothrix arctica sp. nov., isolated from Arctic seawater.
Int. J. Syst. Evol. Microbiol. 68(12): 3851-3855.
[180] Song J, Jeon HT, Lim Y, Joung Y, Cho J-C. 2018.
Winogradskyella aurantiaca sp. nov., isolated from seawater.
Int. J. Syst. Evol. Microbiol. 68(10): 3260-3265.
[179] Cho J-C, Seong C-N, Joh K-S, Cha C-J, Bae J-W, Yi H-N, Lee S-D, Kim N-K, Yoon J-H. 2018.
A report of 17 unrecorded bacterial species of Korea belonging to the phylum Bacteroidetes.
J. Species Res. 7(3): 231-239.
[178] Joung Y, Park M, Jang H-J, Jung I, Cho J-C. 2018.
A report of 22 unrecorded bacterial species in Korea, isolated from the North Han River basin in 2017.
J. Species Res. 7(3): 193-201.
[177] Joung Y, Jang H-J, Park M, Song J, Cho J-C. 2018.
Pedobacter aquicola sp. nov., isolated from freshwater.
J. Microbiol. 56 (7): 478-484.
[176] Lee D-H, Jang H-J, Bae J-W, Cho J-C, Jang K-Y, Joh K-S, Seong C-N, Cha C-J. 2018.
A report of 22 unrecorded bacterial species in Korea in the phyla Bacteroidetes and Rhodothermaeota.
J. Species Res. 7(2): 123-134.
[175] Maeng S-H, Baek C-Y, Bae J-W, Cha C-J, Jahng K-Y, Joh K-S, Kim W-Y, Lee S-D, Cho J-C, Yi H-N. 2018.
A report of 28 unrecorded bacterial species, phylum Bacteroidetes, in Korea. 2018.
J. Species Res. 7(2): 104-113.
[174] Moon K, Kang I, Kim S, Kim S-J, Cho J-C. 2018.
Genomic and ecological study of two distinctive freshwater bacteriophages infecting a Comamonadaceae bacterium.
[173] Park M, Song J, Nam GG, Kim S, Joung Y, Cho J-C. 2018.
Flavobacterium lacicola sp. nov., isolated from a freshwater lake.
Int. J. Syst. Evol. Microbiol. 68(5): 1565-1570.
[172] Song J, Lim Y, Joung Y, Cho J-C, Kogure K. 2018.
Rubritalea profundi sp. nov., isolated from deep-seawater and emended description of the genus Rubritalea in the phylum Verrucomicrobia.
Int. J. Syst. Evol. Microbiol. 68(4): 1384-1389.
[171] Park M, Song J, Nam GG, Joung Y, Zhao L, Kim MK, Cho J-C. 2018.
Deinococcus lacus sp. nov., a gamma radiation-resistant bacterium isolated from an artificial freshwater pond.
Int. J. Syst. Evol. Microbiol. 68(4): 1372-1377.
[170] Lee N-Y, Cha C-J, Im W-T, Kim S-B, Seong C-N, Bae J-W, Jahng K-Y, Cho J-C, Joh K-S, Jeon C-O, Yi H, Lee S-D. 2018.
A report of 42 unrecorded actinobacterial species in Korea.
J. Species Res. 7(1): 36-49.
[169] Kim M-K, Park J-S, Yun B-R, Bae J-W, Cha C-J, Cho J-C, Im W-T, Jahng K-Y, Jeon C-O, Joh K-S, Kim W-Y, Lee S-D, Seong C-N, Yi H, Kim S-B. 2018.
Report of 39 unrecorded bacterial species in Korea belonging to Gammaproteobacteria.
J. Species Res. 7(1): 24-35.
[168] Joung Y, Cha C-J, Im W-T, Jeon C-O, Joh K-S, Kim S-B, Kim W-Y, Lee S-D, Cho J-C. 2018.
A report on 24 unrecorded bacterial species of Korea isolated in 2016, belonging to the orders Rhizobiales and Sphingomonadales in the class Alphaproteobacteria.
J. Species Res. 7(1): 13-23.
[167] Kang I, Lim Y, Cho J-C. 2018.
Complete genome sequence of Granulosicoccus antarcticus type strain IMCC3135T, a marine gammaproteobacterium with a putative dimethylsulfoniopropionate demethylase gene.
2017
[166] Moon K, Kang I, Kim S, Kim S-J, Cho J-C. 2017.
Genome characteristics and environmental distribution of the first phage that infects the LD28 clade, a freshwater methylotrophic bacterial group.
Environ Microbiol. 19(11): 4714-4727.
[165] Park M, Nam GG, Kim S, Joen HT, Joung Y, Cho J-C. 2017.
Flavobacterium chuncheonense sp. nov. and Flavobacterium luteum sp. nov., isolated from a freshwater lake.
Int. J. Syst. Evol. Microbiol. 67 (11): 4409-4415.
[164] Lee S-D, Joung Y, Cho J-C. 2017.
Phreatobacter stygius sp. nov., isolated from pieces of wood in a lava cave and emended description of the genus Phreatobacter.
Int. J. Syst. Evol. Microbiol. 67 (9): 3296-3300.
[163] Baek K, Choi A, Lee YM, Lee HK, Cho J-C. 2017.
Planktotalea arctica sp. nov., isolated from Arctic seawater.
Int. J. Syst. Evol. Microbiol. 67 (9): 3501-3505.
[162] Kang H-Y, Kim H-N, Song J-H, Cho J-C, Joh K-S, Joung Y. 2017.
Lacihabitans lacunae sp. nov., isolated from a lagoon.
Int. J. Syst. Evol. Microbiol. 67 (8): 2509-2513.
[161] Nam GG, Joung Y, Park M, Kim S, Jeon HT, Cho J-C. 2017.
Flavobacterium soyangense sp. nov., a psychrotolerant bacterium, isolated from an oligotrophic freshwater lake.
Int. J. Syst. Evol. Microbiol. 67(7): 2440-2445.
[160] Jeon HT, Joung Y, Kim S, Lim Y, Cho J-C. 2017.
A report on 17 unrecorded bacterial species in Korea isolated from Lakes Soyang and Chungju in 2016.
J. Species Res. 6(2): 163-170.
[159] Siddiqi MZ, Kim S-B, Cho J-C, Yoon J-H, Joh K-S, Seong C-N, Bae J-W, Jahng K-Y, Jeon C-O, Im W-T. 2017.
Description of 39 unrecorded bacterial species in Korea, belonging to the class Alphaproteobacteria.
J. Species Res. 6(2): 141-153.
[158] Kim K-H, Yoon J-H, Kim S-B, Jahng K-Y, Cho J-C, Joh K-S, Cha C-J, Seong C-N, Bae J-W, Im W-T, Jeon C-O. 2017.
A report of 31 unrecorded bacterial species belonging to the class Alphaproteobacteria in Korea.
J. Species Res. 6(2): 129-140.
[157] Cho S-H, Yoon J-H, Kim S-B, Jahng K-Y, Cho J-C, Joh K-S, Seong C-N, Bae J-W, Im W-T, Jeon C-O. 2017.
A report of 29 unrecorded bacterial species belonging to the phylum Bacteroidetes in Korea.
J. Species Res. 6(2): 119-128.
[156] Kim H-S, Cha C-J, Cho J-C, Im W-T, Jahng K-Y, Jeon C-O, Joh K-S, Kim S-B, Seong C-N, Kim W-Y, Yi H-N, Lee S-D, Yoon J-H, Bae J-W. 2017.
A report on 57 unrecorded bacterial species in Korea in the classes Betaproteobacteria and Gammaproteobacteria.
J. Species Res. 6(2): 101-118.
[155] Kim S, Kang I, Cho J-C. 2017.
Genomic analysis of a freshwater Actinobacterium,“Candidatus Limnosphaera aquatica” strain IMCC26207, isolated from Lake Soyang.
J. Microbiol. Biotechnol. 27(4): 825-833.
[154] Kim M-S, Lee J-H, Kim S-B, Cho J-C, Lee S-D, Joh K-S, Cha C-J, Im W-T, Bae J-W, Jahng K-Y, Yi H-N, Seong C-N. 2017.
Unrecorded bacterial species belonging to the phylum Actinobacteria originated from Republic of Korea.
J. Species Res. 6(1): 25-41.
[153] Kim M-K, Seong C-N, Jahng K-Y, Cha C-J, Joh K-S, Bae J-W, Cho J-C, IM W-T, Kim S-B. 2017.
Report of 21 unrecorded bacterial species in Korea belonging to Betaproteobacteria and Epsilonproteobacteria.
J. Species Res. 6(1): 15-24.
[152] Ko K-S, Cha C-J, Im W-T, Kim S-B, Seong C-N, Bae J-W, Jahng K-Y, Cho J-C, Joh K-S, Lee S-D. 2017.
A report of 34 unrecorded bacterial species in Korea, belonging to the Actinobacteria.
J. Species Res. 6(1): 1-14.
[151] Park M, Joung Y, Nam GG, Kim S, Cho J-C. 2017.
Flavobacterium inkyongense sp. nov., isolated from an artificial freshwater pond.
Int. J. Syst. Evol. Microbiol. 67 (1): 82-86.
[150] Seo J-H, Kang I, Yang S-J, Cho J-C. 2017.
Characterization of spatial distribution of the bacterial community in the South Sea of Korea.
[149] Kang I, Kim S, Islam R, Cho J-C. 2017.
The first complete genome sequences of the acI lineage, the most abundant freshwater Actinobacteria, obtained by whole-genome-amplification of dilution-to-extinction cultures.
2016
[148] Yang S-J, Kang I, Cho J-C. 2016.
Expansion of cultured bacterial diversity by large-scale dilution-to-extinction culturing from a single seawater sample.
[147] Nam GG, Joung Y, Song J, Lim Y, Cho J-C. 2016.
Emticicia fontis sp. nov., isolated from a freshwater pond.
Int. J. Syst. Evol. Microbiol. 66:5161-5166.
[146] Kang I, Kang D, Cho J-C. 2016.
Complete genome sequence of bacteriophage P2559Y, a marine phage that infects Croceibacter atlanticus HTCC2559.
[145] Song J, Joung Y, Park S, Cho J-C*, Kogure K. 2016.
Rubrivirga profundi sp. nov., isolated from deep-sea water, and emended description of the genus Rubrivirga.
Int. J. Syst. Evol. Microbiol. 66:3253-3257.
[144] Yang J-A, Kang I, Moon M, Ryu U-C, Kwon KK, Cho J-C, Oh H-M. 2016.
Complete genome sequence of Celeribacter marinus IMCC12053T, the host strain of marine bacteriophage P12053L.
[143] Lim Y, Joung Y, Nam GG, Jahng KW, Kim SB, Joh K, Cha C-J, Seong CN, Bae JW, Im WT, Cho J-C. 2016.
A report on 33 unrecorded bacterial species of Korea isolated in 2014, belonging to the class Gammaproteobacteria.
J. Species Res. 5:241-253.
[142] Kim MS, Lee JH, Kang JW, Kim SB, Cho J-C, Yoon JH, Joh K, Cha CJ, Im WT, Bae JW, Jahng KY, Jeon CO, Seong CN. 2016.
A report of 38 unrecorded bacterial species in Korea, belonging to the phylum Actinobacteria.
J. Species Res. 5:223-234.
[141] Jin HM, Yoon JH, Kim SB, Jahng KY, Cho J-C, Joh K, Cha CJ, Seong CN, Bae JW, Im WT, Jeon CO. 2016.
A report of 42 unrecorded bacterial species belonging to the Alphaproteobacteria in Korea.
J. Species Res. 5:206-219.
[140] Jung YT, Bae JW, Jeon CO, Joh K, Seong CN, Jahng KY, Cho J-C, Cha CJ, Im WT, Kim SB, Yoon JH. 2016.
A report of 31 unrecorded bacterial species in South Korea belonging to the class Gammaproteobacteria.
J. Species Res. 5:188-200.
[139] Kim PS, Cha CJ, Cho J-C, Chun J, Im WT, Jahng KY, Jeon CO, Joh K, Kim SB, Seong CN, Yoon JH, Bae JW. 2016.
A report of 21 unreported bacterial species in Korea, belonging to the Betaproteobacteria.
J. Species Res. 5:179-187.
[138] Choi JH, Cha JH, Bae JW, Cho J-C, Chun J, Im WT, Jahng KY, Jeon CO, Joh K, Kim SB, Seong CN, Yoon JH, Cha CJ. 2016.
Report on 31 unrecorded bacterial species in Korea that belong to the phylum Actinobacteria.
J. Species Res. 5:1-13.
2015
[137] Song J. Choi A, Im M, Joung Y, Yoshizawa S, Cho J-C*, Kogure K. 2015.
Aurantivirga profunda gen. nov., sp. nov., isolated from deep-seawater, a novel member of the family Flavobacteriaceae.
Int. J. Syst. Evol. Microbiol. 65:4850-4856.
[136] Joung Y, Seo M, Kang H, Kim H, Ahn T-S, Cho J-C, Joh K. 2015.
Emticicia aquatica sp. nov., a species of the family Cytophagaceae isolated from fresh water.
Int. J. Syst. Evol. Microbiol. 65:4358-4362.
[135] Choi A, Song J, Joung Y, Kogure K, Cho J-C. 2015.
Lentisphaera profundi sp. nov., isolated from deep-sea water.
Int. J. Syst. Evol. Microbiol. 65:4186-4190.
[134] Moon K, Kang I, Kim S, Cho J-C*, Kim S-J. 2015.
Complete genome sequence of bacteriophage P26218 infecting Rhodoferax sp. strain IMCC26218.
[133] Choi A, Kang I, Yang S-J, Cho J-C. 2015.
Complete genome sequence of bacteriophage P8625, the first lytic phage that infects Verrucomicrobia.
[132] Song S, Lee B, Yeom J-H, Hwang S. Kang I, Cho J-C, Ha N-C, Bae J, Lee K, Kim Y-H. 2015.
MdsABC-mediated pathway for pathogenicity in Salmonella enterica serovar Typhimurium.
Infect. Immun. 83(11):4266-4276.
[131] Kang I, Jang H, Cho J-C. 2015.
Complete genome sequences of bacteriophages P12002L and P12002S, two lytic phages that infect a marine Polaribacter strain.
[130] Baek K, Choi A, Cho J-C. 2015.
Eionea flava sp. nov., isolated from coastal seawater, and emended description of the genus Eionea.
Int. J. Syst. Evol. Microbiol. 65:2975~2979.
[129] Kim D-U, Kim S-G, Lee H, Chun J, Cho J-C, Ka J-O. 2015.
Paenibacillus xanthinilyticus sp. nov., isolated from agricultural soil.
Int. J. Syst. Evol. Microbiol. 65:2937-2942.
[128] Liu Q, Kim SB, Cho J-C, Yoon J-H, Joh K, Cha C-J, Chun J, Seong CN, Bae J-W, Jahng KY, Jeon CO, Im W-T. 2015.
A report of 29 unrecorded bacterial species in Korea, belonging to the Alphaproteobacteria.
J. Species Res. 4(2):97-108.
[127] Choi A, Bae J-W, Cha C-J, Chun J, Im W-T, Jahng KW, Jeon CO, Joh K, Kim SB, Seong CN, Yoon J-H, Cho J-C. 2015.
A report of 39 unrecorded bacterial species in Korea, belonging to the Betaproteobacteria and
Gammaproteobacteria.
J. Species Res. 4(2):109-126.
[126] Han J-H, Joung Y, Kim T-S, Bae J-W, Cha C-J, Chun J, Im W-T, Jahng KW, Jeon CO, Joh K, Seong CN, Yoon J-H, Cho J-C, Kim SB. 2015.
Report on 24 unrecorded bacterial species of Korea belonging to the phylum Firmicutes.
J. Species Res. 4(2):127-136.
[125] Chun J, Bae J-W, Cha C-J, Cho J-C, Chun J, Im W-T, Jeon CO, Joh K, Kim SB, Seong CN, Yoon J-H, Jahng KW. 2015. Report on 14 unrecorded bacterial species in Korea that belong to the phyla Bacteroidetes and Deinococcus-Thermus.
J. Species Res. 4(2):137-144.
[124] Choi DH, Park KT, An SM, Lee K, Cho J-C, Lee JH, Kim D, Jeon D, Noh JH. 2015.
Pyrosequencing revealed SAR116 clade as dominant dddP-containing bacteria in oligotrophic NW Pacific Ocean.
[123] Choi A, Baek K, Lee H, Cho J-C. 2015.
Mesonia aquimarina sp. nov., a marine bacterium isolated from coastal seawater.
Int. J. Syst. Evol. Microbiol. 65(1):135-140.
2014
[122] Kang I and Cho J-C. 2014.
Depth-specific distribution of the SAR116 phages revealed by virome binning. J. Microbiol.
[121] Baek K, Choi A, Kang I, Im M, Cho J-C. 2014.
Granulosicoccus marinus sp. nov., isolated from Antarctic seawater, and emended description of the genus Granulosicoccus.
Int. J. Syst. Evol. Microbiol. 64(12):4103-4108.
[120] Baek K, Jo H, Choi A, Kang I, Cho J-C. 2014.
Ulvibacter marinus sp. nov., isolated from coastal seawater.
Int. J. Syst. Evol. Microbiol. 64(6):2041-2046.
[119] Baek K, Choi A, Kang I, Cho J-C. 2014.
Celeribacter marinus sp. nov., isolated from coastal seawater.
Int. J. Syst. Evol. Microbiol. 64(4):1323-1327.
[118] Han D*, Kang I*, Ha HK, Kim HC, Kim O-S, Lee BY, Cho J-C, Hur HG, Lee YK. 2014.
Bacterial communities of surface mixed layer in the Pacific sector of the Western Arctic Ocean during sea-ice melting.
[117] Kwon T, Baek K, Lee K, Kang I, Cho J-C. 2014.
Formosa arctica sp. nov., isolated from Arctic seawater.
Int. J. Syst. Evol. Microbiol. 64(1):78-82.
[116] Joung Y, Kim H, Lee BI, Kang H, Joh K, Kim SH, Kwon HJ, Lee HH, Rahman MM, Seok JH, Choi J-H, Cha JH, Thawng CN, Cha C-J, Choi A, Baek K, Cho J-C. 2014.
Report on 19 unrecorded bacterial species of the phylum Proteobacteria, isolated from Korea in 2011.
J. Species Res. 3:37-46.
2013
[115] Kang JY, Chun J, Choi A, Cho J-C, Jahng KY. 2013.
Nibrella saemangeumensis gen. nov., sp. nov and Nibrella viscosa sp. nov., novel members of the family Cytophagaceae, isolated from seawater.
Int. J. Syst. Evol. Microbiol. 63:4508-4514.
[114] Kang JY, Chun J, Choi A, Moon SH, Cho J-C, Jahng KY. 2013.
Hymenobacter koreensis sp. nov. and Hymenobacter saemangeumensis sp. nov., isolated from estuarine water.
Int. J. Syst. Evol. Microbiol. 63:4568-4573.
[113] Hameed A, Shahina M, Lin SY, Cho J-C, Lai WA, Young CC. 2013.
Kordia aquimaris sp. nov., a zeaxanthin-producing member of the family Flavobacteriaceae isolated from surface seawater, and emended description of the genus Kordia.
Int. J. Syst. Evol. Microbiol. 63:4790-4796.
[112] Islam M, Sultana T, Joe MM, Yim W, Cho J-C, Sa T. 2013.
Nitrogen-fixing bacteria with multiple plant growth-promoting activities enhance growth of tomato and red pepper.
J. Basic Microbiol. 53:1004-1015.
[111] Giebel H-A, Kalhoefer D, Gahl-Janssen R, Choo Y-J, Lee K, Cho J-C, Tindall BJ, Rhiel E, Beardsley C, Aydogmus OO, Voget S, Daniel R, Simon M, Brinkhoff T. 2013.
Planktomarina temperata gen. nov., sp. nov., belonging to the globally distributed RCA cluster of the marine Roseobacter clade, isolated from the German Wadden Sea.
Int. J. Syst. Evol. Microbiol. 63(11):4207-4217.
[110] Baek K, Choi A, Kang I, Lee K, Cho J-C. 2013.
Kordia antarctica sp. nov., isolated from Antarctic seawater.
Int. J. Syst. Evol. Microbiol. 63(10):3617-3622.
[109] Kang I, Oh H-M, Kang D, Cho J-C. 2013.
Genome of a SAR116 bacteriophage shows the prevalence of this phage type in the oceans.
Proc. Nat. Acad. Sci. USA. 110(30):12343-12348.
[108] Choi A and Cho J-C. 2013.
Thalassolituus marinus sp. nov., a hydrocarbon-utilizing marine bacterium.
Int. J. Syst. Evol. Microbiol. 63(6):2234-2238.
[107] Park S, Song J, Yoshizawa S, Choi A, Cho J-C, Kogure K. 2013.
Rubrivirga marina gen. nov., sp. nov., a member of the family Rhodothermaceae isolated from deep seawater.
Int. J. Syst. Evol. Microbiol. 63(6):2229-2233.
[106] Choi A, Yang S-J, Rhee K-H, Cho J-C. 2013.
Lentisphaera marina sp. nov., and emended description of the genus Lentisphaera.
Int. J. Syst. Evol. Microbiol. 63(4):1540-1544.
[105] Choi A, Yang S-J, Cho J-C. 2013.
Lutibacter flavus sp. nov., a marine bacterium isolated from a tidal flat sediment.
2012
[104] Yang S-J, Kang I, Cho J-C. 2012.
Genome sequence of strain IMCC14465, isolated from the East Sea, belonging to the PS1 clade of Alphaproteobacteria.
J. Bacteriol. 194(24):6952-6953.
[103] Islam MR, Sultana T, Cho J-C, Joe MM, Sa T. 2012.
Diversity of free-living nitrogen-fixing bacteria associated with Korean paddy fields.
Ann. Microbiol. 62(4):1643-1650.
[102] Kang I, Kang D, Cho J-C. 2012.
Complete genome sequence of Croceibacter bacteriophage P2559S.
[101] Kang I, Jang H, Oh H-M, Cho J-C. 2012.
Complete genome sequence of Marinomonas bacteriophage P12026.
[100] Kang I, Jang H, Cho J-C. 2012.
Complete genome sequences of two Persicivirga bacteriophages, P12024S and P12024L.
[99] Kang I, Jang H, Oh H-M, Cho J-C. 2012.
Complete genome sequence of Celeribacter bacteriophage P12053L.
[98] Islam MR, Sultana T, Joe MM, Cho J-C, Sa T. 2012.
Comparisons of direct extraction methods of microbial DNA from different paddy soils.
Sau. J. Biol. Sci. 19(3):337-342.
[97] Kang I, Lee K, Yang S-J, Choi A, Kang D, Lee YK, Cho J-C. 2012.
Genome sequence of "Candidatus Aquiluna" sp. strain IMCC13023, a marine member of the Actinobacteria Isolated from an Arctic fjord.
J. Bacteriol. 194(13):3550-3551.
[96] Yi H, Cho J-C, Chun J. 2012.
Flavivirga jejuensis gen. nov., sp. nov., and Flavivirga amylovorans sp. nov., new members of the family Flavobacteriaceae isolated from seawater, and emended descriptions of the genera Psychroserpens andLacinutrix.
Int. J. Syst. Evol. Microbiol. 62(7):1061-1068.
[95] Choi A, Kim K-M, Kang I, Youn S-H, Suh Y-S, Lee Y, Cho J-C. 2012.
Grimontia marina sp. nov., a marine bacterium isolated from the yellow sea.
2011
[94] Yi H, Song J, Cho J-C, Chun J. 2011.
Zobellella aerophila sp. nov., isolated from seashore sand, and emended description of the genus Zobellella.
Int. J. Syst. Evol. Microbiol. 61(10):2491-2495.
[93] Yi H, Cho J-C, Chun J. 2011.
Pontirhabdus pectinivorans gen. nov., sp. nov., isolated from seawater.
Int. J. Syst. Evol. Microbiol. 61(10):2475-2481.
[92] Shin YM, Kim TU, Choi A, Chun J, Lee S, Kim H, Yi H, Jo JH, Cho J-C, Jahng K, Kim K, Joh K, Chun J, Lee HH, Kim SB. 2011.
Species diversity of Betaproteobacteria in the Sumunmulbengdui wetland area of Jeju Island and distribution of novel taxa.
J. Environ. Biol. 29(3):154-161.
[91] Kim H, Kang JY, Choi J, Choe JU, Lee S, Kim TU, Yi H, Jahng K, Cho J-C, Lee HH, Kim K, Kim SB, Chun J, Joh K. 2011. Novel taxa belonging to the class Alphaproteobacteria and Gammaproteobacteria, isolated from the Sumunmulbengdui wetland area of Jeju Island.
J. Environ. Biol. 29(3):144-153.
[90] Choi A, Choi J, Kang JY, Choe JU, Lee S, Kim H, Yi H, Shin YM, Jahng K, Lee HH, Kim K, Joh K, Chun J, Kim SB, Cho J-C. 2011.
Novel species candidates belonging to the phyla Bacteroidetes, Firmicutes, and Actinobacteria isolated from the Halla mountain wetlands.
Kor. J. Environ. Biol. 29(3):126-137.
[89] Kim EH, Jeong H-J, Lee YK, Moon EY, Cho J-C, Lee HK, Hong SG. 2011.
Actimicrobium antarcticum gen. nov., sp. nov., of the family Oxalobacteraceae, isolated from Antarctic coastal seawater.
Curr. Microbiol. 63(2):213-217.
[88] Kang I, Kang D, Oh H-M, Kim H, Kim H-J, Kang T-W, Kim S-W, Cho J-C. 2011.
Genome sequence of strain IMCC2047, a novel marine member of the Gammaproteobacteria.
J. Bacteriol. 193(14):3688-3689.
[87] Jang Y, Oh H-M, Kim H, Kang I, Cho J-C. 2011.
Genome sequence of strain IMCC1989, a novel member of the marine gammaproteobacteria.
J. Bacteriol. 193(14):3672-3673.
[86] Oh H-M, Lee K, Jang Y, Kang I, Kim H-J, Kang T-W, Kim S-Y, Cho J-C. 2011.
Genome sequence of strain IMCC9480, a xanthorhodopsin-bearing betaproteobacterium isolated from the Arctic Ocean.
[85] Jang Y, Oh H-M, Kang I, Lee K, Yang S-J, Cho J-C. 2011.
Genome sequence of strain IMCC3088, a proteorhodopsin-containing marine bacterium belonging to the OM60/NOR5 clade.
J. Bacteriol. 193(13):3415-3416.
[84] Oh H-M, Kang I, Lee K, Jang Y, Lim S-I, Cho J-C. 2011.
Complete genome sequence of strain IMCC9063, belonging to SAR11 subgroup 3, isolated from the Arctic Ocean.
J. Bacteriol. 193(13):3379-3380.
[83] Choi A, Oh H-M, Yang S-J, Cho J-C. 2011.
Kordia periserrulae sp. nov., isolated from the marine polychaete Periserrula leucophryna, and emended description of the genus Kordia.
Int. J. Syst. Evol. Microbiol. 61(4):864-869.
[82] Choi A, Oh H-M, Cho J-C. 2011.
Saccharospirillum aestuarii sp. nov., isolated from tidal flat sediment, and an emended description of the genus Saccharospirillum.
Int. J. Syst. Evol. Microbiol. 61(3):487-492.
[81] Thrash JC*, Cho J-C*, Bertagnolli AD, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. 2011.
Genome sequence of the marine Janibacter sp. strain HTCC2649.
[80] Kang I, Vergin KL, Oh H-M, Choi A, Giovannoni SJ, Cho J-C. 2011.
Genome sequence of strain HTCC2083, a novel member of the marine Roseobacter clade.
[79] Oh H-M, Kang I, Vergin KL, Lee K, Giovannoni SJ, Cho J-C. 2011.
Genome sequence of Oceanicaulis sp. strain HTCC2633, isolated from the Western Sargasso Sea.
[78] Oh H-M, Kang I, Vergin KL, D. Kang, Rhee KH, Giovannoni SJ, Cho J-C. 2011.
Complete genome sequence of strain HTCC2503T of Parvularcula bermudensis, the type species of the order 'Parvularculales' in the Alphaproteobacteria.
[77] Oh H-M, Kang I, Yang S-J, Jang Y, Vergin KL, Giovannoni SJ, Cho J-C. 2011.
Complete genome sequence of strain HTCC2170, a novel member of the genus Maribacter in the family Flavobacteriaceae.
[76] Choi A and Cho J-C. 2010.
Reinekea aestuarii sp. nov., isolated from tidal flat sediment in the Yellow Sea.
Int. J. Syst. Evol. Microbiol. 60(12):2813-2817.
2010
[75] Kang I, Oh H-M, Vergin KL, Giovannoni SJ, Cho J-C. 2010.
Genome sequence of the marine Alphaproteobacterium HTCC2150, assigned to the Roseobacter clade.
J. Bacteriol. 192(23):6315-6316.
[74] Thrash JC*, Cho J-C*, Ferriera S, Johnson J, Vergin KL and Giovannoni SJ. 2010.
Genome sequences of Pelagibaca bermudensis HTCC2601Tand Maritimibacter alkaliphilus HTCC2654T, the type strains of two marine Roseobacter genera.
J. Bacteriol. 192(20):5552-5553.
[73] Kang I, Oh H-M, Lim S-I, Ferriera S, Giovannoni SJ, Cho J-C. 2010.
Genome sequence of Fulvimarina pelagi HTCC2506T, a Mn(II)-Oxidizing alphaproteobacterium possessing an aerobic anoxygenic photosynthetic gene cluster and xanthorhodopsin.
J. Bacteriol. 192(18):4798-4799.
[72] Oh H-M, Kang I, Ferriera S, Giovannoni SJ, Cho J-C. 2010.
Complete genome sequence of Croceibacter atlanticus HTCC2559T.
J. Bacteriol. 192(18): 4796-4797.
[71] Oh H-M, Kang I, Ferriera S, Giovannoni SJ, Cho J-C. 2010.
Genome sequence of the oligotrophic marine gammaproteobacterium HTCC2143 isolated from the Oregon Coast.
J. Bacteriol. 192(17):4530-4531.
[70] Joung Y, Song J, Lee K, Oh H-M, Joh K, Cho J-C. 2010.
Soonwooa buanensis gen. nov., sp. nov., a member of the family Flavobacteriaceae isolated from seawater.
Int. J. Syst. Evol. Microbiol. 60(9):2061-2065.
[69] Kim EH, Cho KH, Lee YM, Yim JH, Lee HK, Cho J-C, Hong SG. 2010.
Diversity of cold-active protease-producing bacteria from Arctic terrestrial and marine environments revealed by enrichment culture.
[68] Thrash JC, Stingl U, Cho J-C, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ . 2010.
Genome sequence of the novel marine Gammaproteobacterium strain HTCC5015.
J. Bacteriol. 192(14):3838-3839
[67] Thrash JC*, Cho J-C*, Ferriera S, Johnson J, Vergin KL, Giovannoni SJ. 2010.
Genome sequences of strains HTCC2148 and HTCC2080 belonging to the OM60/NOR5 clade of the Gammaproteobacteria.
J. Bacteriol. 192(14):3842-3843.
[66] Thrash, JC, Cho J-C*, Vergin KL, Giovannoni SJ. 2010.
The genome sequences of Oceanicola granulosus HTCC2516Tand O. batsensis HTCC2597T.
J. Bacteriol. 192(13):3549-3550
[65] Choi A, Lee K, Oh H-M, Feng J, Cho J-C. 2010.
Litoricola marina sp. nov.
Int. J. Syst. Evol. Microbiol.60(6): 1303-1306.
[64] Oh H-M*, Kwon KK*, Kang I, Kang SG, Lee J-H, Kim S-J, Cho J-C. 2010.
Complete genome sequence of "Candidatus Puniceispirillum marinum" IMCC1322, a representative of the SAR116 clade in the Alphaproteobacteria.
J. Bacteriol.192(12):3240-3241.
[63] Woo J-H, Kang JH, Hwang YO, Cho J-C, Kim S-J, Kang SG. 2010.
Biocatalytic resolution of glycidyl phenyl ether using a novel epoxide hydrolase from a marine bacterium, Rhodobacterales bacterium HTCC2654.
J. Biosci. Bioeng. 109(6):539-544.
[62] Thrash JC*, Cho J-C*, Vergin KL, Morris RM, Giovannoni SJ. 2010.
Genome sequence of Lentisphaera araneosa HTCC2155T, the type species of the order Lentishpaerales in the phylum Lentisphaerae.
J. Bacteriol. 192(11):2938-2939.
[61] Oh H-M, Kim H, Kim K-M, Min G-S, Cho J-C. 2010.
Porticoccus litoralis gen. nov., sp. nov., a gammaproteobacterium isolated from the Yellow Sea.
Int. J. Syst. Evol. Microbiol. 60(4):727-732.
[60] Bae J-Y, Kim KY, Kim KH, Lee K, Cho J-C, Cha C-J. 2010.
Paenibacillus aestuarii sp. nov., isolated from an estuarine wetland.
Int. J. Syst. Evol. Microbiol. 60(3):644-647.
2009
[59] Oh H-M, Giovannoni SJ, Lee K, Ferriera S, Johnson J, Cho J-C. 2009.
Complete genome sequence of Robiginitalea biformata HTCC2501.
J. Bacteriol. 191(22):7144-7145
[58] Yang SJ, Oh H-M, Chung S, Cho J-C. 2009.
Antarcticimonas flava gen. nov., sp. nov., isolated from Antarctic coastal seawater.
[57] Manes-Lazaro R, Song J, Pardo I, Cho J-C, Ferrer S. 2009.
Lactobacillus aquaticus sp. nov., a new bacterium isolated from a Korean freshwater pond.
Int. J. Syst. Evol. Microbiol. 59(9):2215-2218.
[56] Song J, Oh H-M, Cho J-C. 2009.
Improved culturability of SAR11 strains in dilution-to-extinction culturing from the East Sea, West Pacific Ocean.
FEMS Microbiol. Lett. 295(2):141-147.
[55] Kim H, Oh H-M, Yang S-J, Lee J-S, Hong J-S, Cho J-C. 2009.
Marinobacterium marisflavi sp. nov., isolated from a costal seawater.
[54] Oh H-M, Giovannoni SJ, Ferriera S, Johnson J, Cho J-C. 2009.
Complete genome sequence of Erythrobacter litoralis HTCC2594.
J. Bacteriol. 191(7):2419-2420.
[53] Anderson CR, Dick GJ, Chu M-L, Cho J-C, Davis RE, Brauer SL, Tebo BM. 2009.
Aurantimonas manganoxydans sp. nov. and Aurantimonas litoralis sp. nov.: Mn(II) oxidizing representatives of a globally distributed clade of alpha-Proteobacteria from the order Rhizobiales.
[52] Song J, Oh H-M, Cho J-C. 2009.
Inhella Inkyongensis gen. nov., sp. nov., a new freshwater bacterium in the order Burkholderiales.
J. Microbiol. Biotechnol. 19(1):5-10.
[51] Oh H-M, Lee K, Cho J-C. 2009.
Lewinella Antarctica sp. nov., a marine bacterium isolated from Antarctic seawater.
Int. J. Syst. Evol. Microbiol. 59:65-68.
2008
[50] Giovannoni SJ, Hayakawa DH, Tripp HJ, Stingl U, Givan SA, Cho J-C, Oh H-M, Kitner JB, Vergin KL, Rappe MS. 2008.
The small genome of an abundant coastal ocean methylotroph. Environ.
[49] Stingl U, Cho J-C, Foo W, Vergin KL, Lanoil B, Giovannoni SJ. 2008.
Dilution-to-extinction culturing of psychrotolerant planktonic bacteria from permanently ice-covered lakes in the McMurdo Dry Valleys, Antarctica.
[48] Chou JH. Jiang S-R, Cho J-C, Song J, Lin M-C, Chen W-M. 2008.
Azonexus hydrophilus sp. nov., nifH gene-harbouring bacteria isolated from freshwater.
Int. J. Syst. Evol. Microbiol. 58(4):946-951.
[47] Lee K, Lee HK, Cho J-C. 2008.
Hahella antarctica sp. nov., isolated from Antarctic seawater.
Int. J. Syst. Evol. Microbiol. 58:353-356.
[46] Yang S-J and Cho J-C. 2008.
Gaetbulibacter marinus sp. nov., isolated from coastal seawater, and emended description of the genus Gaetbulibacter.
Int. J. Syst. Evol. Microbiol. 58:315-318.
[45] Song J, Choo Y-J, Cho J-C. 2008.
Quantification of White Spot Syndrome Virus (WSSV) in seawaters using real-time PCR and correlation analyses between WSSV and environmental parameters.
Kor. J. Microbiol. 44(1): 49-55.
[44] Song J, Choo Y-J, Cho J-C. 2008.
Perlucidibaca piscinae gen. nov., sp. nov., a freshwater bacterium belonging to the family Moraxellaceae.
Int. J. Syst. Evol. Microbiol. 58(1):97-102.
2007
[43] Choi TH, Lee HK, Lee K, Cho J-C. 2007.
Ulvibacter antarcticus sp. nov., isolated from Antarctic coastal seawater.
Int. J. Syst. Evol. Microbiol. 57:2922-2925.
[42] Lee K, Lee HK, Choi TH, Cho J-C. 2007.
Sejongia marina sp. nov., isolated from Antarctic seawater.
Int. J. Syst. Evol. Microbiol. 57:2917-2921.
[41] Lee K, Lee HK, Choi TH, Cho J-C. 2007.
Robiginitomaculum antarcticum gen. nov., sp. nov., an Antarctic isolate in the family Hyphomonadaceae.
Int. J. Syst. Evol. Microbiol. 57:2596-2599.
[40] Lee K, Lee HK, Choi TH, Kim KM, Cho J-C. 2007.
Granulosicoccaceae fam. nov., to include Granulosicoccus antarcticus gen. nov., sp. nov., a non-phototrophic, obligately aerobic cheomoheterotroph in the order Chromatiales, isolated from Antarctic seawater.
J. Microbiol. Biotechnol. 17(9): 1483-1490.
[39] Song J. and Cho J-C. 2007.
Methylibium aquaticum sp. nov., a betaproteobacterium isolated from a eutrophic freshwater pond.
Int. J. Syst. Evol. Microbiol. 57:2125-2128.
[38] Lee K, Choo Y-J, Giovannoni SJ, Cho J-C. 2007.
Ruegeria pelagia sp. nov., isolated from the Sargasso Sea, Atlantic Ocean.
Int. J. Syst. Evol. Microbiol. 57:1815-1818.
[37] Kim H, Choo Y-J, Cho J-C. 2007.
Litoricolaceae fam. nov., to include Litoricola lipolytica gen. nov., sp. nov., a marine bacterium belonging to the order Oceanospirillales.
Int. J. Syst. Evol. Microbiol. 57:1793-1798.
[36] Yang S-J, Choo Y-J, Cho J-C. 2007.
Lutimonas vermicola gen. nov. sp. nov. a member of the family Flavobacteriaceae isolated from the marine polychaete Periserrula leucophryna.
Int. J. Syst. Evol. Microbiol. 57:1679-1684.
[35] Kwon KK, Yang S-J, Lee HS, Cho J-C, Kim S-J. 2007.
Sufflavibacter maritimus gen. nov., sp. nov., a novel Flavobacteriaceae bacterium Isolated from marine environments.
J. Microbiol. Biotechnol. 17(8):1379-1384.
[34] Woo J-H, Hwang Y-O, Kang SG, Lee HS, Cho J-C, Kim S-J. 2007.
Cloning and characterization of three novel epoxide hydrolases from a marine bacterium, Erythrobacter litoralis HTCC2594.
Appl. Microbiol. Biotechnol.76:365-375.
[33] Kim H, Choo Y-J, Song J, Lee J-S, Lee KC, Cho J-C. 2007.
Marinobacterium litorale sp. nov. in the order Oceanospirillales.
Int. J. Syst. Evol. Microbiol. 57:1659-1662.
[32] Lee K, Choo Y-J, Giovannoni SJ, Cho J-C. 2007.
Maritimibacter alkaliphilus gen. nov., sp. nov., a genome-sequenced marine bacterium of the Roseobacter clade in the order Rhodobacterales.
Int. J. Syst. Evol. Microbiol. 57:1653-1658.
[31] Lin K.-Y., Sheu S-Y, Chang P-S, Cho J-C, Chen W-M. 2007.
Oceanicola marinus sp. nov., a marine alphaproteobacterium isolated from seawater collected off Taiwan.
Int. J. Syst. Evol. Microbiol. 57:1625-1629.
[30] Cho J-C, Stapels MD, Morris RM, Vergin KL, Schwalbach MS, Givan SA, Barofsky DF, Giovannoni SJ. 2007.
Polyphyletic photosynthetic reaction centre genes in oligotrophic marine Gammaproteobacteria.
Environ. Microbiol. 9(6):1456-1463.
[29] Stingl U, Desiderio RA, Cho J-C, Vergin KL, Giovannoni SJ. 2007.
The SAR92 clade: An abundant coastal clade of culturable marine bacteria possessing proteorhodopsin.
Appl. Environ. Microbiol. 73(7): 2290-2296.
[28] Choo Y-J, Lee K, Song J, Cho J-C. 2007.
Puniceicoccus vermicola gen. nov., sp. nov., a novel marine bacterium, and description of Puniceicoccaceae fam. nov., Puniceicoccales ord. nov., Opitutaceae fam. nov., Opitutales ord. nov. and Opitutaeclassis nov. in the phylum 'Verrucomicrobia'.
Int. J. Syst. Evol. Microbiol. 57(3): 532-537.
[27] Choi DH*, Cho J-C*, Lanoil BD, Giovannoni SJ, Cho BC. 2007.
Maribius salinis gen. nov., sp. nov., isolated from a solar saltern and Maribius Pelagius sp. nov., cultured from the Sargasso Sea, belonging to the Roseobacter clade
Int. J. Syst. Evol. Microbiol. 57(2): 270-275.
[26] Song J., Yang S-J, Cho J-C. 2007.
'Bring to Lab' of 19 novel species among 60 isolates retrieved from a freshwater pond.
J. Microbiol. Biotechnol. 17(1):168-175.
2006
[25] Nicastro D, Schwartz C, Pierson J, Cho J-C, Giovannoni SJ, McIntosh JR. 2006.
Three-dimensional structure of the tiny bacterium Pelagibacter ubique studied by cryo-electron tomography.
Microsc. Microanal. 12(sup2):180-181.
[24] Cho J-C and Giovannoni SJ. 2006.
Pelagibaca bermudensis gen. nov., sp. nov., a novel marine bacterium within the Roseobacter clade in the order Rhodobacterales.
Int. J. Syst. Evol. Microbiol. 56(4): 855-859.
2005
[23] Giovannoni SJ, Bibbs L, Cho J-C, Stapels MD, Desiderio R, Vergin KL, Rappe MS, Laney S. Wilhelm LJ, Tripp HJ, Mathur EJ, Barofsky DF. 2005.
Proteorhodopsin in the ubiquitous marine bacterium SAR11.
[22] Morris, RM, Vergin KL, Cho J-C, Giovannoni SJ, Rappe MS, Carlson CA. 2005.
Temporal and spatial response of bacterioplankton lineages to annual convective overturn at the Bermuda Atlantic time-series study.
Limnol. Oceanogr. 50(5):1687-1696.
2004
[21] Stapels MD, Cho J-C, Giovannoni SJ, Barofsky DF. 2004.
Proteomic analysis of novel marine bacterioplankton using MALDI and ESI mass spectrometry.
[20] Cho J-C, Park K-J, Ihm H-S, Park J-E, Kim S-Y, Kang I, Lee K-H, Jahng D, Lee D-H, Kim S-J. 2004.
A novel continuous toxicity test system using a luminously modified freshwater bacterium. Biosens. Bioelctron. 20(2): 338-344.
[19] Cho J-C and Giovannoni SJ. 2004.
Robiginitalea biformata gen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae with a higher G+C content.
Int. J. Syst. Evol. Microbiol. 54: 1101-1106.
[18] Cho J-C and Giovannoni SJ. 2004.
Oceanicola granulosus gen. nov., sp. nov. and Oceanicola batsensis sp. nov., poly-beta-hydroxybutyrate-producing marine bacteria in the order 'Rhodobacterales'.
Int. J. Syst. Evol. Microbiol. 54:1129-1136.
[17] Cho J-C, Vergin KL, Morris RM, Giovannoni SJ. 2004.
Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum, Lentisphaerae.
Environ. Microbiol. 6:611-621.
[16] Cho J-C and Giovannoni SJ. 2004.
Cultivation and growth characteristics of a diverse group of oligotrophic marine Gammaproteobacteria.
Appl. Environ. Microbiol. 70: 432-440.
2003
[15] Cho J-C and Giovannoni SJ. 2003. Fulvimarina pelagi gen. nov., sp. nov., a marine bacterium that forms a deep evolutionary lineage of descent in the order "Rhizobiales". Int. J. Syst. Evol. Microbiol. 53: 1853-1859.
[14] Cho J-C and Giovannoni SJ. 2003. Parvularcula bermudensisgen. nov., sp. nov., a marine bacterium that forms a deep branch in the alpha-Proteobacteria. Int. J. Syst. Evol. Microbiol. 53:1031-1036.
[13] Cho J-C and Giovannoni SJ. 2003. Croceibacter atlanticusgen. nov., sp. nov., a novel marine bacterium in the family Flavobacteriaceae. Syst. Appl. Microbiol. 26(1): 76-83.
2002
[12] Lee C., Cho J-C, Lee S-H, Lee D-G, Kim S-J. 2002. Distribution of Aeromonas spp. as identified by 16S rDNA restriction fragment length polymorphism analysis in a trout farm.
J. Appl. Microbiol. 93(6): 976-985.
2000
[11] Cho HB, Lee S-H, Cho J-C, Kim S-J. 2000.
Detection of adenoviruses and enteroviruses in tap water and river water by reverse transcription multiplex PCR.
Can. J. Microbiol. 46(5):417-424.
[10] Cho J-C and Kim S-J. 2000.
Molecular ecological analyses of the bacterial community in groundwater.
Microbes and Industry 13(2): 43-52.
[9] Cho J-C, Cho HB, Kim S-J. 2000.
Heavy contamination of a subsurface aquifer and a stream by livestock wastewater in a stock farming area, Wonju, Korea.
Environ. Pollut. 109(1): 137-146.
[8] Cho J-C and Kim S-J. 2000.
Increase in bacterial community diversity in subsurface aquifers receiving livestock wastewater input.
Appl. Environ. Microbiol. 66(3): 956-965.
1999
[7] Cho J-C and Kim S-J. 1999.
Green fluorescent protein-based direct viable count to verify a viable but non-culturable state of Salmonella typhiin environmental samples.
J. Microbiol. Methods 36(3): 227-235.
[6] Cho J-C and Kim S-J. 1999.
Viable but nonculturable state of a GFP-tagged environmental isolate of Salmonella typhiin groundwater and pond water.
FEMS Microbiol. Lett. 170(1): 257-264.
[5] Cho J-C and Kim S-J. 1999.
Evaluation of bacteriological safety in deep confined aquifers.
Kor. J. Microbiol. 35(1): 47-52.
1997
[4] Cho J-C, Kim M-W, Lee D-H, Kim S-J. 1997.
Response of bacterial communities to changes in composition of extracellular organic carbon from phytoplankton in Daechung Reservoir (Korea).
Arch. Hydrobiol. 138(4): 559-576.
1996
[3] Cho J-C, Lee DH, Cho YC, Cho JC, Kim S-J. 1996.
Direct extraction of DNA from soil for amplification of 16S rRNA gene sequences by polymerase chain reaction.
1995
[2] Kim MW, Kim MH, Cho J-C, Kim S-J. 1995.
Changes of biological community by cyanobacterial bloom in Daechung Reservoir.
[1] Cho J-C, Lee S-H, Park SJ, Kim S-J. 1995.
Environmental impacts of inland-based trout farms on the water quality of a stream.